Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SH2D4AQ9H788 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 SAPCD2P3-201ENST00000455031 850 ntBASIC21.19■□□□□ 0.98
SH2D4AQ9H788 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 BNIP3P18-201ENST00000593976 575 ntBASIC21.19■□□□□ 0.98
SH2D4AQ9H788 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 AC104692.2-201ENST00000603054 253 ntBASIC21.19■□□□□ 0.98
SH2D4AQ9H788 AL121912.1-201ENST00000603683 238 ntBASIC21.19■□□□□ 0.98
SH2D4AQ9H788 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.19■□□□□ 0.98
SH2D4AQ9H788 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH2D4AQ9H788 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 ANO7L1-203ENST00000602586 1720 ntBASIC21.18■□□□□ 0.98
SH2D4AQ9H788 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 AC079781.3-201ENST00000449110 356 ntBASIC21.18■□□□□ 0.98
SH2D4AQ9H788 AC068472.1-201ENST00000474589 881 ntBASIC21.18■□□□□ 0.98
SH2D4AQ9H788 AC096582.2-201ENST00000510860 516 ntBASIC21.18■□□□□ 0.98
SH2D4AQ9H788 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 AC114341.1-201ENST00000618070 349 ntBASIC21.18■□□□□ 0.98
SH2D4AQ9H788 REXO1L6P-202ENST00000619970 1078 ntBASIC21.18■□□□□ 0.98
SH2D4AQ9H788 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.18■□□□□ 0.98
SH2D4AQ9H788 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 AC099343.3-201ENST00000605834 2503 ntBASIC21.17■□□□□ 0.98
SH2D4AQ9H788 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH2D4AQ9H788 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SH2D4AQ9H788 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms