Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 AC079781.3-201ENST00000449110 356 ntBASIC19.62■□□□□ 0.73
NXF3Q9H4D5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 LINC01711-201ENST00000598340 967 ntBASIC19.62■□□□□ 0.73
NXF3Q9H4D5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.62■□□□□ 0.73
NXF3Q9H4D5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NXF3Q9H4D5 AC132938.6-201ENST00000623828 1655 ntBASIC19.62■□□□□ 0.73
NXF3Q9H4D5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 AKR1C7P-201ENST00000305623 895 ntBASIC19.61■□□□□ 0.73
NXF3Q9H4D5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 KRT18P65-201ENST00000439811 1286 ntBASIC19.61■□□□□ 0.73
NXF3Q9H4D5 KRT16P4-201ENST00000453883 522 ntBASIC19.61■□□□□ 0.73
NXF3Q9H4D5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 AC087289.5-201ENST00000586076 3175 ntBASIC19.61■□□□□ 0.73
NXF3Q9H4D5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NXF3Q9H4D5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 WIZP1-201ENST00000531444 2299 ntBASIC19.6■□□□□ 0.73
NXF3Q9H4D5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.6■□□□□ 0.73
NXF3Q9H4D5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.59■□□□□ 0.73
NXF3Q9H4D5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 AC114341.1-201ENST00000618070 349 ntBASIC19.59■□□□□ 0.73
NXF3Q9H4D5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.59■□□□□ 0.73
NXF3Q9H4D5 TNXA-203ENST00000507684 2038 ntBASIC19.59■□□□□ 0.73
NXF3Q9H4D5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms