Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AC007663.1-201ENST00000438948 1240 ntBASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 FITM1-202ENST00000559294 800 ntBASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 AC112497.1-201ENST00000624824 639 ntBASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TUBB1Q9H4B7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB1Q9H4B7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 INGX-201ENST00000359239 846 ntBASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 BX088651.1-201ENST00000540551 451 ntBASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 MIR3180-4-201ENST00000582223 153 ntBASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 AC132938.6-201ENST00000623828 1655 ntBASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 AC141586.5-201ENST00000624546 2050 ntBASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TUBB1Q9H4B7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 CCR12P-201ENST00000446203 998 ntBASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms