Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX47Q9H0S4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19■□□□□ 0.63
DDX47Q9H0S4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX47Q9H0S4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 AF186192.3-201ENST00000583427 947 ntBASIC18.99■□□□□ 0.63
DDX47Q9H0S4 AP000692.2-201ENST00000608391 879 ntBASIC18.99■□□□□ 0.63
DDX47Q9H0S4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX47Q9H0S4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 AC073195.1-201ENST00000607241 877 ntBASIC18.98■□□□□ 0.63
DDX47Q9H0S4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 AL163051.1-201ENST00000569214 1512 ntBASIC18.98■□□□□ 0.63
DDX47Q9H0S4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX47Q9H0S4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 AC009102.3-201ENST00000623118 1491 ntBASIC18.97■□□□□ 0.63
DDX47Q9H0S4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 AC093010.1-201ENST00000473625 1624 ntBASIC18.97■□□□□ 0.63
DDX47Q9H0S4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 KRT18P55-202ENST00000578578 1546 ntBASIC18.97■□□□□ 0.63
DDX47Q9H0S4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX47Q9H0S4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms