Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 AC107918.4-202ENST00000641623 219 ntBASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 AC002472.2-201ENST00000442739 958 ntBASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 AC093214.1-201ENST00000511688 1107 ntBASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP3Q9BZ76 AC006128.1-201ENST00000624704 1661 ntBASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 AC025678.2-201ENST00000562061 970 ntBASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 AC079416.2-201ENST00000625035 1193 ntBASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP3Q9BZ76 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AL031432.2-201ENST00000566714 459 ntBASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AL928711.1-201ENST00000570165 459 ntBASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP3Q9BZ76 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms