Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 AC093677.2-201ENST00000600169 1863 ntBASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 AC135776.1-201ENST00000319817 2481 ntBASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 LETM1P2-201ENST00000597330 2178 ntBASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 AP003733.1-201ENST00000491725 852 ntBASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 PHGDH-209ENST00000641074 1780 ntBASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.91■□□□□ 0.46
CCM2Q9BSQ5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 AC113404.2-201ENST00000507884 177 ntBASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCM2Q9BSQ5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCM2Q9BSQ5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCM2Q9BSQ5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCM2Q9BSQ5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 PCED1CP-201ENST00000419887 785 ntBASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 AL645929.1-201ENST00000420084 975 ntBASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 AP000550.4-202ENST00000639755 178 ntBASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 BICD1-207ENST00000551848 1962 ntBASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 AC005332.1-201ENST00000577698 1310 ntBASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCM2Q9BSQ5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2Q9BSQ5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms