Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.85■□□□□ 0.13
COL12A1Q99715 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
COL12A1Q99715 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL12A1Q99715 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL12A1Q99715 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL12A1Q99715 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL12A1Q99715 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.84■□□□□ 0.13
COL12A1Q99715 AC136632.2-201ENST00000512891 861 ntBASIC15.84■□□□□ 0.13
COL12A1Q99715 LINC00628-201ENST00000628516 1289 ntBASIC15.84■□□□□ 0.13
COL12A1Q99715 AC025048.6-201ENST00000634326 1161 ntBASIC15.84■□□□□ 0.13
COL12A1Q99715 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
COL12A1Q99715 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL12A1Q99715 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 AC006504.4-201ENST00000592118 1568 ntBASIC15.84■□□□□ 0.13
COL12A1Q99715 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
COL12A1Q99715 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.84■□□□□ 0.13
COL12A1Q99715 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.84■□□□□ 0.13
COL12A1Q99715 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.84■□□□□ 0.13
COL12A1Q99715 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.84■□□□□ 0.13
COL12A1Q99715 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.84■□□□□ 0.13
COL12A1Q99715 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.84■□□□□ 0.13
COL12A1Q99715 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 AC112777.1-201ENST00000540175 1423 ntBASIC15.84■□□□□ 0.13
COL12A1Q99715 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.84■□□□□ 0.13
COL12A1Q99715 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
COL12A1Q99715 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.84■□□□□ 0.13
COL12A1Q99715 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL12A1Q99715 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL12A1Q99715 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.83■□□□□ 0.13
COL12A1Q99715 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.83■□□□□ 0.13
COL12A1Q99715 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.13
COL12A1Q99715 NME2P1-201ENST00000426182 414 ntBASIC15.83■□□□□ 0.13
COL12A1Q99715 VN2R19P-201ENST00000442399 1052 ntBASIC15.83■□□□□ 0.13
COL12A1Q99715 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL12A1Q99715 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL12A1Q99715 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.83■□□□□ 0.13
COL12A1Q99715 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL12A1Q99715 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 AC113404.2-201ENST00000507884 177 ntBASIC15.83■□□□□ 0.12
COL12A1Q99715 AC015911.4-201ENST00000588022 1070 ntBASIC15.83■□□□□ 0.12
COL12A1Q99715 AC022145.2-201ENST00000598203 171 ntBASIC15.83■□□□□ 0.12
COL12A1Q99715 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.83■□□□□ 0.12
COL12A1Q99715 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.83■□□□□ 0.12
COL12A1Q99715 KRT19P2-202ENST00000557173 1012 ntBASIC15.83■□□□□ 0.12
COL12A1Q99715 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 AC073592.4-201ENST00000623827 446 ntBASIC15.83■□□□□ 0.12
COL12A1Q99715 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL12A1Q99715 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.82■□□□□ 0.12
COL12A1Q99715 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 TSPY16P-201ENST00000449843 468 ntBASIC15.82■□□□□ 0.12
COL12A1Q99715 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.82■□□□□ 0.12
COL12A1Q99715 AC023141.5-201ENST00000458585 616 ntBASIC15.82■□□□□ 0.12
COL12A1Q99715 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL12A1Q99715 TERF1P3-201ENST00000505638 1227 ntBASIC15.82■□□□□ 0.12
COL12A1Q99715 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.82■□□□□ 0.12
COL12A1Q99715 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.82■□□□□ 0.12
COL12A1Q99715 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
COL12A1Q99715 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.82■□□□□ 0.12
COL12A1Q99715 DUX4L27-201ENST00000554796 1261 ntBASIC15.82■□□□□ 0.12
COL12A1Q99715 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.82■□□□□ 0.12
COL12A1Q99715 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.82■□□□□ 0.12
COL12A1Q99715 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.82■□□□□ 0.12
COL12A1Q99715 KRT8P32-201ENST00000512863 1461 ntBASIC15.82■□□□□ 0.12
COL12A1Q99715 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL12A1Q99715 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL12A1Q99715 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.81■□□□□ 0.12
COL12A1Q99715 AL513210.1-201ENST00000629608 234 ntBASIC15.81■□□□□ 0.12
COL12A1Q99715 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.81■□□□□ 0.12
COL12A1Q99715 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COL12A1Q99715 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms