Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA3Q99618 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDCA3Q99618 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA3Q99618 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.88■□□□□ 0.61
CDCA3Q99618 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA3Q99618 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.88■□□□□ 0.61
CDCA3Q99618 AC064836.3-201ENST00000607928 673 ntBASIC18.88■□□□□ 0.61
CDCA3Q99618 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.88■□□□□ 0.61
CDCA3Q99618 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA3Q99618 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDCA3Q99618 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CDCA3Q99618 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.87■□□□□ 0.61
CDCA3Q99618 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.87■□□□□ 0.61
CDCA3Q99618 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 AC023274.1-201ENST00000418278 595 ntBASIC18.87■□□□□ 0.61
CDCA3Q99618 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 MCCD1P2-201ENST00000423228 335 ntBASIC18.87■□□□□ 0.61
CDCA3Q99618 AC007967.3-201ENST00000434308 558 ntBASIC18.87■□□□□ 0.61
CDCA3Q99618 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.87■□□□□ 0.61
CDCA3Q99618 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDCA3Q99618 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 BX005266.1-201ENST00000473402 457 ntBASIC18.87■□□□□ 0.61
CDCA3Q99618 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.87■□□□□ 0.61
CDCA3Q99618 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 PMPCAP1-201ENST00000508114 1576 ntBASIC18.87■□□□□ 0.61
CDCA3Q99618 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.87■□□□□ 0.61
CDCA3Q99618 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.87■□□□□ 0.61
CDCA3Q99618 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.87■□□□□ 0.61
CDCA3Q99618 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDCA3Q99618 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA3Q99618 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
CDCA3Q99618 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA3Q99618 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA3Q99618 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA3Q99618 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CDCA3Q99618 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.86■□□□□ 0.61
CDCA3Q99618 AC108751.1-201ENST00000490852 363 ntBASIC18.86■□□□□ 0.61
CDCA3Q99618 AC122714.2-201ENST00000502787 707 ntBASIC18.86■□□□□ 0.61
CDCA3Q99618 AC136632.2-201ENST00000512891 861 ntBASIC18.86■□□□□ 0.61
CDCA3Q99618 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA3Q99618 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA3Q99618 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.86■□□□□ 0.61
CDCA3Q99618 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.86■□□□□ 0.61
CDCA3Q99618 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CDCA3Q99618 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.86■□□□□ 0.61
CDCA3Q99618 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA3Q99618 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDCA3Q99618 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.86■□□□□ 0.61
CDCA3Q99618 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDCA3Q99618 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.85■□□□□ 0.61
CDCA3Q99618 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CDCA3Q99618 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.85■□□□□ 0.61
CDCA3Q99618 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.85■□□□□ 0.61
CDCA3Q99618 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.85■□□□□ 0.61
CDCA3Q99618 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.85■□□□□ 0.61
CDCA3Q99618 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDCA3Q99618 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms