Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL13Q99616 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL13Q99616 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL13Q99616 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL13Q99616 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL13Q99616 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 LINC01126-201ENST00000623515 1646 ntBASIC15.26■□□□□ 0.03
CCL13Q99616 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 ARMC10P1-201ENST00000313754 855 ntBASIC15.26■□□□□ 0.03
CCL13Q99616 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CCL13Q99616 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 HLA-F-220ENST00000434407 884 ntBASIC15.26■□□□□ 0.03
CCL13Q99616 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL13Q99616 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCL13Q99616 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL13Q99616 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL13Q99616 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 AL024508.2-201ENST00000607749 1894 ntBASIC15.26■□□□□ 0.03
CCL13Q99616 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL13Q99616 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCL13Q99616 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCL13Q99616 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCL13Q99616 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL13Q99616 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL13Q99616 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL13Q99616 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCL13Q99616 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 AL031133.1-201ENST00000406807 723 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL13Q99616 VENTXP5-201ENST00000523979 775 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 ZNF444P1-201ENST00000559497 298 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 AC024563.2-201ENST00000603282 481 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 AL445228.2-201ENST00000605589 952 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 AC083849.1-201ENST00000615227 514 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 AC135776.1-201ENST00000319817 2481 ntBASIC15.25■□□□□ 0.03
CCL13Q99616 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL13Q99616 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL13Q99616 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCL13Q99616 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCL13Q99616 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL13Q99616 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCL13Q99616 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL13Q99616 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCL13Q99616 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.24■□□□□ 0.03
CCL13Q99616 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.24■□□□□ 0.03
CCL13Q99616 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms