Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.67■□□□□ 0.1
CMTM3Q96MX0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 AC004911.1-201ENST00000416316 871 ntBASIC15.67■□□□□ 0.1
CMTM3Q96MX0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 AC097658.1-201ENST00000475555 843 ntBASIC15.67■□□□□ 0.1
CMTM3Q96MX0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SOX15-203ENST00000570788 1093 ntBASIC15.67■□□□□ 0.1
CMTM3Q96MX0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 AL050303.2-201ENST00000619798 666 ntBASIC15.67■□□□□ 0.1
CMTM3Q96MX0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SDHAP2-201ENST00000455183 2001 ntBASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CMTM3Q96MX0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 AC009102.3-201ENST00000623118 1491 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 CROCCP2-202ENST00000412962 2773 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 MIR149-201ENST00000384879 89 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 DUTP2-201ENST00000519164 463 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 AL445675.2-201ENST00000620291 557 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 AC131212.4-201ENST00000623606 975 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 MYC-209ENST00000641252 345 ntBASIC15.66■□□□□ 0.1
CMTM3Q96MX0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CMTM3Q96MX0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms