Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 KRT8P9-201ENST00000558927 1449 ntBASIC18.78■□□□□ 0.6
C9orf72Q96LT7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 KRT18P21-201ENST00000515767 1272 ntBASIC18.78■□□□□ 0.6
C9orf72Q96LT7 KRT18P41-201ENST00000518924 1277 ntBASIC18.78■□□□□ 0.6
C9orf72Q96LT7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 FITM1-202ENST00000559294 800 ntBASIC18.78■□□□□ 0.6
C9orf72Q96LT7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 AL109659.2-201ENST00000606809 1674 ntBASIC18.78■□□□□ 0.6
C9orf72Q96LT7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf72Q96LT7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 MESTP1-201ENST00000404287 994 ntBASIC18.77■□□□□ 0.6
C9orf72Q96LT7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 MIR6786-201ENST00000616843 113 ntBASIC18.77■□□□□ 0.6
C9orf72Q96LT7 FLJ13224-201ENST00000313737 1514 ntBASIC18.77■□□□□ 0.6
C9orf72Q96LT7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.77■□□□□ 0.6
C9orf72Q96LT7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
C9orf72Q96LT7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 AL390955.1-201ENST00000428694 934 ntBASIC18.76■□□□□ 0.59
C9orf72Q96LT7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 AC145285.6-201ENST00000604632 637 ntBASIC18.76■□□□□ 0.59
C9orf72Q96LT7 AC008622.2-201ENST00000617006 1229 ntBASIC18.76■□□□□ 0.59
C9orf72Q96LT7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
C9orf72Q96LT7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 B3GAT3P1-201ENST00000471720 806 ntBASIC18.75■□□□□ 0.59
C9orf72Q96LT7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.75■□□□□ 0.59
C9orf72Q96LT7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms