Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 AL023973.1-201ENST00000624619 620 ntBASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 AC067852.2-201ENST00000590513 2313 ntBASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 TERF1P1-201ENST00000311003 1181 ntBASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 RASA4DP-201ENST00000460726 1199 ntBASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 LINC00167-201ENST00000530583 1419 ntBASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 AC134043.2-201ENST00000624206 2238 ntBASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM5Q96HC4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 AL137013.1-201ENST00000432946 1228 ntBASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 AL441883.1-201ENST00000566170 1045 ntBASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 AC006116.8-202ENST00000587620 1550 ntBASIC17.77■□□□□ 0.44
PDLIM5Q96HC4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM5Q96HC4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms