Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE2Q96FN4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FLJ13224-201ENST00000313737 1514 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FAM201B-201ENST00000458407 597 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 AC011506.1-201ENST00000474329 610 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 AC138028.4-201ENST00000564984 1845 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 GNAS-203ENST00000306120 1878 ntBASIC15.84■□□□□ 0.13
CPNE2Q96FN4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE2Q96FN4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE2Q96FN4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 MFAP1P1-201ENST00000442257 1255 ntBASIC15.83■□□□□ 0.12
CPNE2Q96FN4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 SLC25A1P4-201ENST00000567977 778 ntBASIC15.83■□□□□ 0.12
CPNE2Q96FN4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 CD177P1-201ENST00000606252 935 ntBASIC15.83■□□□□ 0.12
CPNE2Q96FN4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE2Q96FN4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms