Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 MIR770-201ENST00000390219 98 ntBASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 AC136632.2-201ENST00000512891 861 ntBASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 C20orf181-201ENST00000623918 480 ntBASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 LINC01126-201ENST00000623515 1646 ntBASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM43Q96BQ3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 PMPCAP1-201ENST00000508114 1576 ntBASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 AC073592.4-201ENST00000623827 446 ntBASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM43Q96BQ3 CLDN5-201ENST00000403084 2357 ntBASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 AC007967.3-201ENST00000434308 558 ntBASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 AL513190.1-201ENST00000621254 727 ntBASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms