Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 AP006294.2-201ENST00000641667 209 ntBASIC19.17■□□□□ 0.66
RNF25Q96BH1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 GMCL1P1-201ENST00000463439 1581 ntBASIC19.17■□□□□ 0.66
RNF25Q96BH1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF25Q96BH1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 AC092338.2-201ENST00000568827 1415 ntBASIC19.17■□□□□ 0.66
RNF25Q96BH1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.16■□□□□ 0.66
RNF25Q96BH1 AL163051.1-201ENST00000569214 1512 ntBASIC19.16■□□□□ 0.66
RNF25Q96BH1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 KRT18P23-201ENST00000435622 1283 ntBASIC19.16■□□□□ 0.66
RNF25Q96BH1 TSPY15P-201ENST00000457163 923 ntBASIC19.16■□□□□ 0.66
RNF25Q96BH1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF25Q96BH1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF25Q96BH1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 SDHAP2-201ENST00000455183 2001 ntBASIC19.15■□□□□ 0.66
RNF25Q96BH1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AC103798.2-201ENST00000624292 632 ntBASIC19.15■□□□□ 0.66
RNF25Q96BH1 AL034417.3-201ENST00000641100 1043 ntBASIC19.15■□□□□ 0.66
RNF25Q96BH1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AC138028.4-201ENST00000564984 1845 ntBASIC19.15■□□□□ 0.66
RNF25Q96BH1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF25Q96BH1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF25Q96BH1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNF25Q96BH1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF25Q96BH1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF25Q96BH1 AC012313.1-201ENST00000593393 3059 ntBASIC19.14■□□□□ 0.66
RNF25Q96BH1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RNF25Q96BH1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.14■□□□□ 0.66
RNF25Q96BH1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 AL096828.2-201ENST00000567259 1965 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms