Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 AL157888.1-201ENST00000631930 593 ntBASIC17.53■□□□□ 0.4
UBE2E3Q969T4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.53■□□□□ 0.4
UBE2E3Q969T4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE2E3Q969T4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 AC138028.4-201ENST00000564984 1845 ntBASIC17.52■□□□□ 0.4
UBE2E3Q969T4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 LINC01126-201ENST00000623515 1646 ntBASIC17.52■□□□□ 0.4
UBE2E3Q969T4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 AC211429.1-201ENST00000415277 523 ntBASIC17.52■□□□□ 0.4
UBE2E3Q969T4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.52■□□□□ 0.4
UBE2E3Q969T4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 AL023973.1-201ENST00000624619 620 ntBASIC17.52■□□□□ 0.4
UBE2E3Q969T4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBE2E3Q969T4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2E3Q969T4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2E3Q969T4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBE2E3Q969T4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
UBE2E3Q969T4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
UBE2E3Q969T4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.51■□□□□ 0.39
UBE2E3Q969T4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 AC093010.1-201ENST00000473625 1624 ntBASIC17.51■□□□□ 0.39
UBE2E3Q969T4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.51■□□□□ 0.39
UBE2E3Q969T4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 AC099343.3-201ENST00000605834 2503 ntBASIC17.5■□□□□ 0.39
UBE2E3Q969T4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms