Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.39■□□□□ 0.21
PTP4A1Q93096 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A1Q93096 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTP4A1Q93096 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.39■□□□□ 0.21
PTP4A1Q93096 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTP4A1Q93096 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.39■□□□□ 0.21
PTP4A1Q93096 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTP4A1Q93096 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.39■□□□□ 0.21
PTP4A1Q93096 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.39■□□□□ 0.21
PTP4A1Q93096 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 AC006116.8-202ENST00000587620 1550 ntBASIC16.38■□□□□ 0.21
PTP4A1Q93096 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 AC009102.3-201ENST00000623118 1491 ntBASIC16.38■□□□□ 0.21
PTP4A1Q93096 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 MIR4674-201ENST00000582457 87 ntBASIC16.38■□□□□ 0.21
PTP4A1Q93096 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTP4A1Q93096 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTP4A1Q93096 AL645608.8-201ENST00000606034 2086 ntBASIC16.38■□□□□ 0.21
PTP4A1Q93096 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 MIR149-201ENST00000384879 89 ntBASIC16.37■□□□□ 0.21
PTP4A1Q93096 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 AC093827.2-201ENST00000512654 315 ntBASIC16.37■□□□□ 0.21
PTP4A1Q93096 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 AC141586.5-201ENST00000624546 2050 ntBASIC16.37■□□□□ 0.21
PTP4A1Q93096 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTP4A1Q93096 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PTP4A1Q93096 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTP4A1Q93096 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTP4A1Q93096 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms