Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.39■■□□□ 1.17
RPGRQ92834 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RPGRQ92834 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.38■■□□□ 1.17
RPGRQ92834 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.38■■□□□ 1.17
RPGRQ92834 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RPGRQ92834 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.38■■□□□ 1.17
RPGRQ92834 PGAM5P1-201ENST00000518923 814 ntBASIC22.38■■□□□ 1.17
RPGRQ92834 AC012640.2-201ENST00000561606 901 ntBASIC22.38■■□□□ 1.17
RPGRQ92834 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.38■■□□□ 1.17
RPGRQ92834 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.38■■□□□ 1.17
RPGRQ92834 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.38■■□□□ 1.17
RPGRQ92834 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
RPGRQ92834 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RPGRQ92834 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.37■■□□□ 1.17
RPGRQ92834 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 AC005104.2-201ENST00000427818 678 ntBASIC22.37■■□□□ 1.17
RPGRQ92834 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 AL356488.2-201ENST00000602755 427 ntBASIC22.37■■□□□ 1.17
RPGRQ92834 AC025062.2-201ENST00000605477 670 ntBASIC22.37■■□□□ 1.17
RPGRQ92834 FAM197Y3-203ENST00000618346 717 ntBASIC22.37■■□□□ 1.17
RPGRQ92834 AL139288.1-201ENST00000623748 933 ntBASIC22.37■■□□□ 1.17
RPGRQ92834 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.37■■□□□ 1.17
RPGRQ92834 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.37■■□□□ 1.17
RPGRQ92834 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RPGRQ92834 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.36■■□□□ 1.17
RPGRQ92834 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.36■■□□□ 1.17
RPGRQ92834 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RPGRQ92834 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.36■■□□□ 1.17
RPGRQ92834 AC112698.1-201ENST00000510299 916 ntBASIC22.36■■□□□ 1.17
RPGRQ92834 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPGRQ92834 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.36■■□□□ 1.17
RPGRQ92834 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.36■■□□□ 1.17
RPGRQ92834 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.36■■□□□ 1.17
RPGRQ92834 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPGRQ92834 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RPGRQ92834 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPGRQ92834 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.36■■□□□ 1.17
RPGRQ92834 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RPGRQ92834 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.35■■□□□ 1.17
RPGRQ92834 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.35■■□□□ 1.17
RPGRQ92834 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RPGRQ92834 AL591424.1-201ENST00000442569 1213 ntBASIC22.35■■□□□ 1.17
RPGRQ92834 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.35■■□□□ 1.17
RPGRQ92834 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.35■■□□□ 1.17
RPGRQ92834 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.35■■□□□ 1.17
RPGRQ92834 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.35■■□□□ 1.17
RPGRQ92834 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.35■■□□□ 1.17
RPGRQ92834 AC034105.1-201ENST00000563488 319 ntBASIC22.35■■□□□ 1.17
RPGRQ92834 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.35■■□□□ 1.17
RPGRQ92834 Z83851.2-201ENST00000609564 659 ntBASIC22.35■■□□□ 1.17
RPGRQ92834 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RPGRQ92834 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.34■■□□□ 1.17
RPGRQ92834 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RPGRQ92834 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RPGRQ92834 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RPGRQ92834 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms