Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 AC124864.1-201ENST00000623408 392 ntBASIC16.43■□□□□ 0.22
RNF138Q8WVD3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 KRT18P55-202ENST00000578578 1546 ntBASIC16.43■□□□□ 0.22
RNF138Q8WVD3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 AC022898.2-201ENST00000616822 1312 ntBASIC16.43■□□□□ 0.22
RNF138Q8WVD3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF138Q8WVD3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.42■□□□□ 0.22
RNF138Q8WVD3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 AP005901.3-202ENST00000581653 237 ntBASIC16.42■□□□□ 0.22
RNF138Q8WVD3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 KRT18P1-202ENST00000452408 1331 ntBASIC16.42■□□□□ 0.22
RNF138Q8WVD3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF138Q8WVD3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC233702.3-201ENST00000578656 1387 ntBASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC091607.1-201ENST00000490318 1060 ntBASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC005336.2-201ENST00000593183 939 ntBASIC16.41■□□□□ 0.22
RNF138Q8WVD3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.41■□□□□ 0.22
RNF138Q8WVD3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF138Q8WVD3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF138Q8WVD3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF138Q8WVD3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF138Q8WVD3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF138Q8WVD3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF138Q8WVD3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms