Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 AL121912.1-201ENST00000603683 238 ntBASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 AC009154.2-201ENST00000621177 724 ntBASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC38A9Q8NBW4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 AC120498.9-201ENST00000339021 3867 ntBASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 POM121L3P-201ENST00000419331 1163 ntBASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 AF238378.1-201ENST00000526806 358 ntBASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 AP002469.2-201ENST00000531724 424 ntBASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 MIR5100-201ENST00000579544 119 ntBASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC38A9Q8NBW4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 MTCL1P1-201ENST00000446207 792 ntBASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 AC096582.2-201ENST00000510860 516 ntBASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC38A9Q8NBW4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms