Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AF186192.3-201ENST00000583427 947 ntBASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 AC036111.1-201ENST00000533973 1582 ntBASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 GPAT2P1-201ENST00000444924 1672 ntBASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01561Q8N1V8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AC008894.3-201ENST00000624324 3103 ntBASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AL135905.2-201ENST00000584934 1404 ntBASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AC046158.3-201ENST00000624947 2558 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms