Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL096828.2-201ENST00000567259 1965 ntBASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 COX11P1-201ENST00000489116 835 ntBASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 AL157888.1-201ENST00000631930 593 ntBASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC116Q8IYX3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AL133373.2-201ENST00000623187 2828 ntBASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AL031432.5-201ENST00000641059 760 ntBASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 AC073508.3-201ENST00000619697 1419 ntBASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC116Q8IYX3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 BX664615.1-201ENST00000443558 458 ntBASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 KRT18P57-201ENST00000443599 1254 ntBASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC116Q8IYX3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms