Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC007967.3-201ENST00000434308 558 ntBASIC22.75■■□□□ 1.23
COL23A1Q86Y22 BCRP1-201ENST00000444246 691 ntBASIC22.75■■□□□ 1.23
COL23A1Q86Y22 PRYP5-201ENST00000451909 266 ntBASIC22.75■■□□□ 1.23
COL23A1Q86Y22 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.75■■□□□ 1.23
COL23A1Q86Y22 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 AL031432.2-201ENST00000566714 459 ntBASIC22.74■■□□□ 1.23
COL23A1Q86Y22 AL928711.1-201ENST00000570165 459 ntBASIC22.74■■□□□ 1.23
COL23A1Q86Y22 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.74■■□□□ 1.23
COL23A1Q86Y22 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 GPR89P-201ENST00000407924 1495 ntBASIC22.73■■□□□ 1.23
COL23A1Q86Y22 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.73■■□□□ 1.23
COL23A1Q86Y22 HCG4B-203ENST00000450128 991 ntBASIC22.73■■□□□ 1.23
COL23A1Q86Y22 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 AL096865.1-201ENST00000606796 927 ntBASIC22.73■■□□□ 1.23
COL23A1Q86Y22 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL23A1Q86Y22 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 AL139400.1-201ENST00000366220 510 ntBASIC22.72■■□□□ 1.23
COL23A1Q86Y22 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 VN2R19P-201ENST00000442399 1052 ntBASIC22.72■■□□□ 1.23
COL23A1Q86Y22 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL23A1Q86Y22 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL23A1Q86Y22 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms