Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.29■□□□□ 0.84
TRIM50Q86XT4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM50Q86XT4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM50Q86XT4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 AC096582.2-201ENST00000510860 516 ntBASIC20.27■□□□□ 0.84
TRIM50Q86XT4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM50Q86XT4 AC005336.2-201ENST00000593183 939 ntBASIC20.27■□□□□ 0.84
TRIM50Q86XT4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.27■□□□□ 0.84
TRIM50Q86XT4 AC126763.1-201ENST00000552015 2118 ntBASIC20.27■□□□□ 0.84
TRIM50Q86XT4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM50Q86XT4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.27■□□□□ 0.83
TRIM50Q86XT4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM50Q86XT4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AP000347.1-202ENST00000435868 847 ntBASIC20.26■□□□□ 0.83
TRIM50Q86XT4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AP002469.2-201ENST00000531724 424 ntBASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AL160237.2-201ENST00000556165 472 ntBASIC20.26■□□□□ 0.83
TRIM50Q86XT4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM50Q86XT4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 AC068472.1-201ENST00000474589 881 ntBASIC20.25■□□□□ 0.83
TRIM50Q86XT4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 AC008687.5-201ENST00000593746 558 ntBASIC20.25■□□□□ 0.83
TRIM50Q86XT4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms