Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDDC2Q7Z4H3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HDDC2Q7Z4H3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.61■□□□□ 0.25
HDDC2Q7Z4H3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDDC2Q7Z4H3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDDC2Q7Z4H3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HDDC2Q7Z4H3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 MIR564-202ENST00000385049 94 ntBASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 AL139384.1-201ENST00000612143 3047 ntBASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDDC2Q7Z4H3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 GPAT2P1-201ENST00000444924 1672 ntBASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 AC008556.1-201ENST00000610908 2040 ntBASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 BX088651.1-201ENST00000540551 451 ntBASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 MIR4497-201ENST00000583208 89 ntBASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 AC008622.2-201ENST00000617006 1229 ntBASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 KRT8P7-201ENST00000533003 1432 ntBASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HDDC2Q7Z4H3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HDDC2Q7Z4H3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 AC128688.1-201ENST00000487626 519 ntBASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 AC009065.1-201ENST00000564055 1225 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms