Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 MTDHP4-201ENST00000600287 670 ntBASIC12.63□□□□□ -0.39
CSMD3Q7Z407 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD3Q7Z407 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AC068472.1-201ENST00000474589 881 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AL031432.2-201ENST00000566714 459 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AL928711.1-201ENST00000570165 459 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AL078644.1-201ENST00000609881 752 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AC148477.5-201ENST00000625164 1645 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AL096865.1-201ENST00000606796 927 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 AC012645.4-201ENST00000610691 1061 ntBASIC12.62□□□□□ -0.39
CSMD3Q7Z407 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD3Q7Z407 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 AC006504.4-201ENST00000592118 1568 ntBASIC12.61□□□□□ -0.39
CSMD3Q7Z407 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 LAGE3P1-201ENST00000425356 484 ntBASIC12.61□□□□□ -0.39
CSMD3Q7Z407 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 ELL2P1-201ENST00000413990 1906 ntBASIC12.61□□□□□ -0.39
CSMD3Q7Z407 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 AL513190.1-201ENST00000621254 727 ntBASIC12.61□□□□□ -0.39
CSMD3Q7Z407 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CSMD3Q7Z407 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.6□□□□□ -0.39
CSMD3Q7Z407 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms