Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 AF186192.3-201ENST00000583427 947 ntBASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 AL353807.1-201ENST00000427475 662 ntBASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 AC011298.2-201ENST00000617989 482 ntBASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCHD4Q6ZW05 AC099398.1-201ENST00000567919 2776 ntBASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AL645608.8-201ENST00000606034 2086 ntBASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AC011506.1-201ENST00000474329 610 ntBASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AC026271.3-201ENST00000571884 352 ntBASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 AL031985.4-201ENST00000642138 673 ntBASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
PTCHD4Q6ZW05 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 PCDHA12-202ENST00000613593 2588 ntBASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTCHD4Q6ZW05 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms