Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC27.45■■□□□ 1.98
CDC42BPAQ5VT25 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC27.45■■□□□ 1.98
CDC42BPAQ5VT25 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 AP000867.4-201ENST00000641616 219 ntBASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 IMP4-203ENST00000409935 958 ntTSL 5 BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 AD001527.2-201ENST00000622994 785 ntBASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CDC42BPAQ5VT25 ESPNP-201ENST00000270691 2015 ntBASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 INIP-202ENST00000374236 874 ntTSL 2 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 URGCP-206ENST00000446958 365 ntTSL 2 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 KRT18P3-201ENST00000451602 1288 ntBASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CDC42BPAQ5VT25 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 FIS1-203ENST00000442303 631 ntTSL 3 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 COPE-211ENST00000600932 1144 ntTSL 5 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 AC148477.5-201ENST00000625164 1645 ntBASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDC42BPAQ5VT25 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 ELK2BP-201ENST00000415014 1224 ntBASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 BX005266.1-201ENST00000473402 457 ntBASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 AP001160.2-201ENST00000596071 487 ntBASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.41■■□□□ 1.98
CDC42BPAQ5VT25 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPAQ5VT25 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 AC073130.3-201ENST00000624389 2278 ntBASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC27.39■■□□□ 1.98
CDC42BPAQ5VT25 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CDC42BPAQ5VT25 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
CDC42BPAQ5VT25 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC27.38■■□□□ 1.97
CDC42BPAQ5VT25 AC108751.1-201ENST00000490852 363 ntBASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms