Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AL118558.3-201ENST00000607414 1079 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AC126915.1-201ENST00000522847 1038 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 PPP6R2P1-201ENST00000450880 1275 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AC004233.3-201ENST00000607794 1269 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 GNAS-203ENST00000306120 1878 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AC103810.3-201ENST00000583567 96 ntBASIC9.88□□□□□ -0.83
UBR4Q5T4S7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
UBR4Q5T4S7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AL109936.8-201ENST00000641772 604 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AL627223.1-201ENST00000416693 442 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC009237.14-201ENST00000609975 1594 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC104457.1-201ENST00000401024 814 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 DDX43P3-201ENST00000441064 443 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 MIR4706-201ENST00000582134 82 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AP005212.1-201ENST00000581547 1997 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC096633.1-201ENST00000422446 749 ntBASIC9.87□□□□□ -0.83
UBR4Q5T4S7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC9.87□□□□□ -0.83
UBR4Q5T4S7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms