Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 AC005498.2-205ENST00000593218 784 ntBASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 AD001527.2-201ENST00000622994 785 ntBASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC29.59■■■□□ 2.33
SNAPC4Q5SXM2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 AC006504.4-201ENST00000592118 1568 ntBASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SNAPC4Q5SXM2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 CCDC74BP1-201ENST00000508880 1123 ntBASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 AC004706.3-202ENST00000621574 984 ntBASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 AC010507.1-201ENST00000633895 436 ntBASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SNAPC4Q5SXM2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 LINC01126-201ENST00000623515 1646 ntBASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SNAPC4Q5SXM2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 VN2R19P-201ENST00000442399 1052 ntBASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 PRYP5-201ENST00000451909 266 ntBASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 PAWRP1-201ENST00000451083 565 ntBASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC29.55■■■□□ 2.32
SNAPC4Q5SXM2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SNAPC4Q5SXM2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC29.54■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms