Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 AC132008.2-207ENST00000454517 770 ntBASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 AC079776.4-201ENST00000511039 504 ntBASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 HLA-A-201ENST00000376802 1334 ntBASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNFT1Q5M7Z0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 TP73-AS1-210ENST00000637775 1455 ntBASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNFT1Q5M7Z0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 AL662844.1-201ENST00000546340 181 ntBASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNFT1Q5M7Z0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AC126763.1-201ENST00000552015 2118 ntBASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 AL031598.1-201ENST00000561511 1773 ntBASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
RNFT1Q5M7Z0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms