Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 RBM17P3-201ENST00000417687 1192 ntBASIC21.76■■□□□ 1.07
PDS5AQ29RF7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 AL662844.1-201ENST00000546340 181 ntBASIC21.75■■□□□ 1.07
PDS5AQ29RF7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.75■■□□□ 1.07
PDS5AQ29RF7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 AC096633.1-201ENST00000422446 749 ntBASIC21.74■■□□□ 1.07
PDS5AQ29RF7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 TP73-AS1-207ENST00000624167 988 ntBASIC21.74■■□□□ 1.07
PDS5AQ29RF7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PDS5AQ29RF7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDS5AQ29RF7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 AL138781.2-201ENST00000617896 1843 ntBASIC21.72■■□□□ 1.07
PDS5AQ29RF7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDS5AQ29RF7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms