Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 LINC01126-201ENST00000623515 1646 ntBASIC17.58■□□□□ 0.4
HMGCS1Q01581 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 TSPY14P-201ENST00000303979 915 ntBASIC17.57■□□□□ 0.4
HMGCS1Q01581 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 LTB4R2-202ENST00000528054 3092 ntBASIC17.57■□□□□ 0.4
HMGCS1Q01581 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMGCS1Q01581 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
HMGCS1Q01581 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HMGCS1Q01581 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 EGLN1P1-201ENST00000531623 762 ntBASIC17.56■□□□□ 0.4
HMGCS1Q01581 AC104390.1-201ENST00000555663 520 ntBASIC17.56■□□□□ 0.4
HMGCS1Q01581 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.56■□□□□ 0.4
HMGCS1Q01581 GNAS-203ENST00000306120 1878 ntBASIC17.56■□□□□ 0.4
HMGCS1Q01581 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMGCS1Q01581 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HMGCS1Q01581 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.55■□□□□ 0.4
HMGCS1Q01581 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 AC010947.1-201ENST00000623454 693 ntBASIC17.55■□□□□ 0.4
HMGCS1Q01581 AC010653.2-201ENST00000623505 997 ntBASIC17.55■□□□□ 0.4
HMGCS1Q01581 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMGCS1Q01581 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGCS1Q01581 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 SLC25A6P5-201ENST00000435663 894 ntBASIC17.54■□□□□ 0.4
HMGCS1Q01581 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms