Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42EP1Q00587 AC125634.1-201ENST00000438758 1403 ntBASIC19.82■□□□□ 0.76
CDC42EP1Q00587 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.82■□□□□ 0.76
CDC42EP1Q00587 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42EP1Q00587 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CDC42EP1Q00587 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDC42EP1Q00587 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42EP1Q00587 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 AC096582.2-201ENST00000510860 516 ntBASIC19.81■□□□□ 0.76
CDC42EP1Q00587 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 KRT8P10-201ENST00000450021 1447 ntBASIC19.81■□□□□ 0.76
CDC42EP1Q00587 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.81■□□□□ 0.76
CDC42EP1Q00587 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 AC097374.2-201ENST00000618617 1306 ntBASIC19.8■□□□□ 0.76
CDC42EP1Q00587 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 AL662844.1-201ENST00000546340 181 ntBASIC19.8■□□□□ 0.76
CDC42EP1Q00587 AC126763.1-201ENST00000552015 2118 ntBASIC19.8■□□□□ 0.76
CDC42EP1Q00587 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42EP1Q00587 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AC022898.2-201ENST00000616822 1312 ntBASIC19.79■□□□□ 0.76
CDC42EP1Q00587 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AC011467.2-201ENST00000598425 242 ntBASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AC064862.7-201ENST00000604520 867 ntBASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AL031008.1-201ENST00000619963 541 ntBASIC19.79■□□□□ 0.76
CDC42EP1Q00587 AC005082.1-201ENST00000413042 2259 ntBASIC19.79■□□□□ 0.76
CDC42EP1Q00587 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42EP1Q00587 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms