Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCL20P78556 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 GMCL1P1-201ENST00000463439 1581 ntBASIC14.36□□□□□ -0.11
CCL20P78556 AL138688.1-201ENST00000624851 1594 ntBASIC14.36□□□□□ -0.11
CCL20P78556 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL20P78556 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.36□□□□□ -0.11
CCL20P78556 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL20P78556 AC005829.2-201ENST00000571422 1056 ntBASIC14.36□□□□□ -0.11
CCL20P78556 AC069236.1-201ENST00000604339 616 ntBASIC14.36□□□□□ -0.11
CCL20P78556 AC005181.1-201ENST00000604782 1256 ntBASIC14.36□□□□□ -0.11
CCL20P78556 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.36□□□□□ -0.11
CCL20P78556 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL20P78556 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.36□□□□□ -0.11
CCL20P78556 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL20P78556 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
CCL20P78556 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL20P78556 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL20P78556 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.36□□□□□ -0.11
CCL20P78556 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCL20P78556 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.36□□□□□ -0.11
CCL20P78556 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL20P78556 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL20P78556 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL20P78556 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.35□□□□□ -0.11
CCL20P78556 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCL20P78556 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
CCL20P78556 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.35□□□□□ -0.11
CCL20P78556 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCL20P78556 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CCL20P78556 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCL20P78556 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCL20P78556 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL20P78556 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms