Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IRX3P78415 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.17■□□□□ 0.98
IRX3P78415 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
IRX3P78415 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.17■□□□□ 0.98
IRX3P78415 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX3P78415 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IRX3P78415 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
IRX3P78415 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
IRX3P78415 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IRX3P78415 AL032819.2-201ENST00000624543 2162 ntBASIC21.17■□□□□ 0.98
IRX3P78415 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
IRX3P78415 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
IRX3P78415 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.16■□□□□ 0.98
IRX3P78415 IL9RP2-201ENST00000423948 1312 ntBASIC21.16■□□□□ 0.98
IRX3P78415 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
IRX3P78415 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 PMS2P1-201ENST00000431037 1228 ntBASIC21.16■□□□□ 0.98
IRX3P78415 KRT18P67-201ENST00000432816 1264 ntBASIC21.16■□□□□ 0.98
IRX3P78415 AF186996.4-201ENST00000467186 377 ntBASIC21.16■□□□□ 0.98
IRX3P78415 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.16■□□□□ 0.98
IRX3P78415 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.16■□□□□ 0.98
IRX3P78415 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.16■□□□□ 0.98
IRX3P78415 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.16■□□□□ 0.98
IRX3P78415 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.16■□□□□ 0.98
IRX3P78415 AL671883.3-201ENST00000603274 991 ntBASIC21.16■□□□□ 0.98
IRX3P78415 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.16■□□□□ 0.98
IRX3P78415 AF228730.7-201ENST00000641842 219 ntBASIC21.16■□□□□ 0.98
IRX3P78415 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
IRX3P78415 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
IRX3P78415 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX3P78415 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX3P78415 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IRX3P78415 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
IRX3P78415 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX3P78415 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
IRX3P78415 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.15■□□□□ 0.98
IRX3P78415 MIR149-201ENST00000384879 89 ntBASIC21.15■□□□□ 0.98
IRX3P78415 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.15■□□□□ 0.98
IRX3P78415 RNA5SP419-201ENST00000515908 135 ntBASIC21.15■□□□□ 0.98
IRX3P78415 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.15■□□□□ 0.98
IRX3P78415 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
IRX3P78415 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.15■□□□□ 0.98
IRX3P78415 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX3P78415 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX3P78415 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.15■□□□□ 0.98
IRX3P78415 AC020916.1-201ENST00000587762 1774 ntBASIC21.15■□□□□ 0.98
IRX3P78415 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.15■□□□□ 0.98
IRX3P78415 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX3P78415 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.14■□□□□ 0.98
IRX3P78415 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.14■□□□□ 0.98
IRX3P78415 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
IRX3P78415 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.14■□□□□ 0.98
IRX3P78415 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
IRX3P78415 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
IRX3P78415 AL031284.1-201ENST00000419297 478 ntBASIC21.14■□□□□ 0.97
IRX3P78415 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
IRX3P78415 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
IRX3P78415 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.14■□□□□ 0.97
IRX3P78415 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IRX3P78415 AC008608.2-201ENST00000606089 416 ntBASIC21.14■□□□□ 0.97
IRX3P78415 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.14■□□□□ 0.97
IRX3P78415 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX3P78415 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.14■□□□□ 0.97
IRX3P78415 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX3P78415 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX3P78415 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
IRX3P78415 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX3P78415 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX3P78415 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
IRX3P78415 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.13■□□□□ 0.97
IRX3P78415 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
IRX3P78415 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX3P78415 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
IRX3P78415 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.13■□□□□ 0.97
IRX3P78415 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.13■□□□□ 0.97
IRX3P78415 AC113404.2-201ENST00000507884 177 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms