Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN2P57739 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.95■□□□□ 0.46
CLDN2P57739 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN2P57739 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.95■□□□□ 0.46
CLDN2P57739 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN2P57739 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN2P57739 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN2P57739 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN2P57739 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN2P57739 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN2P57739 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN2P57739 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN2P57739 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN2P57739 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CLDN2P57739 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN2P57739 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN2P57739 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN2P57739 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN2P57739 AC126763.1-201ENST00000552015 2118 ntBASIC17.94■□□□□ 0.46
CLDN2P57739 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLDN2P57739 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN2P57739 AC005336.2-201ENST00000593183 939 ntBASIC17.94■□□□□ 0.46
CLDN2P57739 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN2P57739 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN2P57739 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN2P57739 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN2P57739 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN2P57739 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CLDN2P57739 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN2P57739 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN2P57739 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN2P57739 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN2P57739 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN2P57739 AP002469.2-201ENST00000531724 424 ntBASIC17.93■□□□□ 0.46
CLDN2P57739 AL121912.1-201ENST00000603683 238 ntBASIC17.93■□□□□ 0.46
CLDN2P57739 AC018445.3-201ENST00000624177 1945 ntBASIC17.93■□□□□ 0.46
CLDN2P57739 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN2P57739 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN2P57739 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN2P57739 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN2P57739 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN2P57739 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN2P57739 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN2P57739 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 POM121L3P-201ENST00000419331 1163 ntBASIC17.92■□□□□ 0.46
CLDN2P57739 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN2P57739 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 AF238378.1-201ENST00000526806 358 ntBASIC17.92■□□□□ 0.46
CLDN2P57739 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 MIR5100-201ENST00000579544 119 ntBASIC17.92■□□□□ 0.46
CLDN2P57739 AL591684.3-201ENST00000605187 298 ntBASIC17.92■□□□□ 0.46
CLDN2P57739 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN2P57739 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN2P57739 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms