Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.8■■□□□ 1.4
RIPK4P57078 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
RIPK4P57078 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RIPK4P57078 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.8■■□□□ 1.4
RIPK4P57078 GUSBP12-201ENST00000513727 720 ntBASIC23.8■■□□□ 1.4
RIPK4P57078 TPSP2-201ENST00000561760 610 ntBASIC23.8■■□□□ 1.4
RIPK4P57078 AC092329.2-201ENST00000598402 547 ntBASIC23.8■■□□□ 1.4
RIPK4P57078 AL592071.1-201ENST00000611956 408 ntBASIC23.8■■□□□ 1.4
RIPK4P57078 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RIPK4P57078 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIPK4P57078 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.8■■□□□ 1.4
RIPK4P57078 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.8■■□□□ 1.4
RIPK4P57078 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RIPK4P57078 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.79■■□□□ 1.4
RIPK4P57078 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.79■■□□□ 1.4
RIPK4P57078 TSPY12P-201ENST00000421279 868 ntBASIC23.79■■□□□ 1.4
RIPK4P57078 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.79■■□□□ 1.4
RIPK4P57078 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIPK4P57078 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.78■■□□□ 1.4
RIPK4P57078 AL096828.2-201ENST00000567259 1965 ntBASIC23.78■■□□□ 1.4
RIPK4P57078 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RIPK4P57078 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RIPK4P57078 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 AC093010.1-201ENST00000473625 1624 ntBASIC23.78■■□□□ 1.4
RIPK4P57078 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 DRAXINP1-201ENST00000437611 948 ntBASIC23.78■■□□□ 1.4
RIPK4P57078 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RIPK4P57078 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.78■■□□□ 1.4
RIPK4P57078 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.78■■□□□ 1.4
RIPK4P57078 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RIPK4P57078 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.77■■□□□ 1.4
RIPK4P57078 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.77■■□□□ 1.4
RIPK4P57078 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RIPK4P57078 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.77■■□□□ 1.4
RIPK4P57078 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RIPK4P57078 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.77■■□□□ 1.4
RIPK4P57078 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.77■■□□□ 1.4
RIPK4P57078 AL845331.1-201ENST00000424978 1190 ntBASIC23.77■■□□□ 1.4
RIPK4P57078 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.77■■□□□ 1.4
RIPK4P57078 AC068472.1-201ENST00000474589 881 ntBASIC23.77■■□□□ 1.4
RIPK4P57078 KRT18P56-201ENST00000507275 550 ntBASIC23.77■■□□□ 1.4
RIPK4P57078 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.77■■□□□ 1.4
RIPK4P57078 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.77■■□□□ 1.4
RIPK4P57078 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.77■■□□□ 1.4
RIPK4P57078 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.77■■□□□ 1.4
RIPK4P57078 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.77■■□□□ 1.4
RIPK4P57078 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RIPK4P57078 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RIPK4P57078 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RIPK4P57078 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
RIPK4P57078 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.76■■□□□ 1.39
RIPK4P57078 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RIPK4P57078 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
RIPK4P57078 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms