Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN6P56747 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN6P56747 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN6P56747 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN6P56747 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN6P56747 MED15P5-201ENST00000423150 992 ntBASIC17.45■□□□□ 0.38
CLDN6P56747 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN6P56747 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN6P56747 IGHV3-22-201ENST00000520721 359 ntBASIC17.45■□□□□ 0.38
CLDN6P56747 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN6P56747 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN6P56747 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLDN6P56747 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN6P56747 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN6P56747 AC112777.1-201ENST00000540175 1423 ntBASIC17.45■□□□□ 0.38
CLDN6P56747 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 HEIH-201ENST00000623091 1652 ntBASIC17.45■□□□□ 0.38
CLDN6P56747 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN6P56747 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN6P56747 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 AC098831.1-202ENST00000438821 336 ntBASIC17.44■□□□□ 0.38
CLDN6P56747 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CLDN6P56747 AC068472.1-201ENST00000474589 881 ntBASIC17.44■□□□□ 0.38
CLDN6P56747 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.44■□□□□ 0.38
CLDN6P56747 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CLDN6P56747 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN6P56747 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN6P56747 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN6P56747 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN6P56747 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN6P56747 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CLDN6P56747 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN6P56747 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN6P56747 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLDN6P56747 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN6P56747 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN6P56747 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN6P56747 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN6P56747 AC034105.1-201ENST00000563488 319 ntBASIC17.43■□□□□ 0.38
CLDN6P56747 AL355385.1-201ENST00000606123 409 ntBASIC17.43■□□□□ 0.38
CLDN6P56747 AC027601.4-201ENST00000611259 610 ntBASIC17.43■□□□□ 0.38
CLDN6P56747 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN6P56747 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLDN6P56747 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN6P56747 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN6P56747 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN6P56747 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLDN6P56747 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN6P56747 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN6P56747 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN6P56747 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN6P56747 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 RBM17P3-201ENST00000417687 1192 ntBASIC17.42■□□□□ 0.38
CLDN6P56747 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN6P56747 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms