Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
EPHB4P54760 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB4P54760 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EPHB4P54760 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EPHB4P54760 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.45■□□□□ 0.86
EPHB4P54760 AC091607.1-201ENST00000490318 1060 ntBASIC20.45■□□□□ 0.86
EPHB4P54760 AP003733.1-201ENST00000491725 852 ntBASIC20.45■□□□□ 0.86
EPHB4P54760 Z69720.1-201ENST00000601483 472 ntBASIC20.45■□□□□ 0.86
EPHB4P54760 AL773604.1-201ENST00000617417 272 ntBASIC20.45■□□□□ 0.86
EPHB4P54760 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.45■□□□□ 0.86
EPHB4P54760 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EPHB4P54760 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EPHB4P54760 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 AC005332.8-201ENST00000622750 2735 ntBASIC20.45■□□□□ 0.86
EPHB4P54760 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB4P54760 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EPHB4P54760 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
EPHB4P54760 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.44■□□□□ 0.86
EPHB4P54760 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 FAM197Y8-203ENST00000450145 560 ntBASIC20.44■□□□□ 0.86
EPHB4P54760 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.44■□□□□ 0.86
EPHB4P54760 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.44■□□□□ 0.86
EPHB4P54760 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.44■□□□□ 0.86
EPHB4P54760 AC064862.7-201ENST00000604520 867 ntBASIC20.44■□□□□ 0.86
EPHB4P54760 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.44■□□□□ 0.86
EPHB4P54760 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.44■□□□□ 0.86
EPHB4P54760 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
EPHB4P54760 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
EPHB4P54760 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHB4P54760 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHB4P54760 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
EPHB4P54760 NSUN5P1-202ENST00000421140 1535 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 NSUN5P2-203ENST00000457352 1529 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 AC009113.1-201ENST00000570267 2443 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 NUS1P2-201ENST00000417358 873 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 AL031284.1-201ENST00000419297 478 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.43■□□□□ 0.86
EPHB4P54760 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB4P54760 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EPHB4P54760 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB4P54760 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EPHB4P54760 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
EPHB4P54760 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB4P54760 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 AC243591.1-201ENST00000452967 1364 ntBASIC20.43■□□□□ 0.86
EPHB4P54760 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EPHB4P54760 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHB4P54760 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHB4P54760 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
EPHB4P54760 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms