Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CLTCL1P53675 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CLTCL1P53675 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CLTCL1P53675 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CLTCL1P53675 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CLTCL1P53675 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC25.95■■□□□ 1.74
CLTCL1P53675 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CLTCL1P53675 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CLTCL1P53675 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC25.95■■□□□ 1.74
CLTCL1P53675 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC25.95■■□□□ 1.74
CLTCL1P53675 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC25.95■■□□□ 1.74
CLTCL1P53675 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CLTCL1P53675 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CLTCL1P53675 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC25.94■■□□□ 1.74
CLTCL1P53675 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC25.94■■□□□ 1.74
CLTCL1P53675 AC093909.1-201ENST00000504731 1122 ntBASIC25.94■■□□□ 1.74
CLTCL1P53675 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC25.94■■□□□ 1.74
CLTCL1P53675 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC25.94■■□□□ 1.74
CLTCL1P53675 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC25.94■■□□□ 1.74
CLTCL1P53675 AC140113.2-201ENST00000604370 208 ntBASIC25.94■■□□□ 1.74
CLTCL1P53675 AC117500.6-201ENST00000624871 588 ntBASIC25.94■■□□□ 1.74
CLTCL1P53675 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC25.94■■□□□ 1.74
CLTCL1P53675 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 AC079776.2-201ENST00000641154 1609 ntBASIC25.94■■□□□ 1.74
CLTCL1P53675 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLTCL1P53675 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC25.93■■□□□ 1.74
CLTCL1P53675 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC25.93■■□□□ 1.74
CLTCL1P53675 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC25.93■■□□□ 1.74
CLTCL1P53675 AC096633.1-201ENST00000422446 749 ntBASIC25.93■■□□□ 1.74
CLTCL1P53675 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC25.93■■□□□ 1.74
CLTCL1P53675 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC25.93■■□□□ 1.74
CLTCL1P53675 MTDHP4-201ENST00000600287 670 ntBASIC25.93■■□□□ 1.74
CLTCL1P53675 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CLTCL1P53675 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC25.93■■□□□ 1.74
CLTCL1P53675 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLTCL1P53675 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.93■■□□□ 1.74
CLTCL1P53675 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
CLTCL1P53675 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC25.92■■□□□ 1.74
CLTCL1P53675 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
CLTCL1P53675 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC25.92■■□□□ 1.74
CLTCL1P53675 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC25.92■■□□□ 1.74
CLTCL1P53675 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC25.92■■□□□ 1.74
CLTCL1P53675 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC25.92■■□□□ 1.74
CLTCL1P53675 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
CLTCL1P53675 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CLTCL1P53675 AP002414.3-201ENST00000589352 1468 ntBASIC25.92■■□□□ 1.74
CLTCL1P53675 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC25.91■■□□□ 1.74
CLTCL1P53675 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CLTCL1P53675 AC092910.1-201ENST00000482027 1129 ntBASIC25.91■■□□□ 1.74
CLTCL1P53675 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.91■■□□□ 1.74
CLTCL1P53675 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLTCL1P53675 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CLTCL1P53675 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC25.9■■□□□ 1.74
CLTCL1P53675 LBH-204ENST00000406087 559 ntTSL 4 BASIC25.9■■□□□ 1.74
CLTCL1P53675 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC25.9■■□□□ 1.74
CLTCL1P53675 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC25.9■■□□□ 1.74
CLTCL1P53675 RPS29-206ENST00000557111 488 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms