Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB28P51157 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB28P51157 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB28P51157 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB28P51157 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RAB28P51157 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB28P51157 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB28P51157 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 BX276092.5-203ENST00000456199 560 ntBASIC17.57■□□□□ 0.4
RAB28P51157 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RAB28P51157 AL121672.3-201ENST00000608644 468 ntBASIC17.57■□□□□ 0.4
RAB28P51157 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAB28P51157 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB28P51157 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB28P51157 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB28P51157 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB28P51157 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB28P51157 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB28P51157 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
RAB28P51157 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB28P51157 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
RAB28P51157 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 AC069148.1-201ENST00000608741 768 ntBASIC17.56■□□□□ 0.4
RAB28P51157 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB28P51157 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 AC093010.1-201ENST00000473625 1624 ntBASIC17.56■□□□□ 0.4
RAB28P51157 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAB28P51157 BCL2-203ENST00000589955 5011 ntBASIC17.56■□□□□ 0.4
RAB28P51157 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB28P51157 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 LINC00167-201ENST00000530583 1419 ntBASIC17.55■□□□□ 0.4
RAB28P51157 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
RAB28P51157 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB28P51157 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
RAB28P51157 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB28P51157 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB28P51157 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB28P51157 UPK3BP1-201ENST00000428678 509 ntBASIC17.55■□□□□ 0.4
RAB28P51157 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB28P51157 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB28P51157 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB28P51157 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 AL096828.2-201ENST00000567259 1965 ntBASIC17.55■□□□□ 0.4
RAB28P51157 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB28P51157 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms