Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC13P31276 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HOXC13P31276 AC005332.3-201ENST00000589904 676 ntBASIC18.83■□□□□ 0.6
HOXC13P31276 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC13P31276 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HOXC13P31276 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC13P31276 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC13P31276 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 KRT89P-201ENST00000620027 1478 ntBASIC18.83■□□□□ 0.6
HOXC13P31276 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC13P31276 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
HOXC13P31276 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 HLA-A-201ENST00000376802 1334 ntBASIC18.82■□□□□ 0.6
HOXC13P31276 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
HOXC13P31276 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
HOXC13P31276 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC13P31276 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC13P31276 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC13P31276 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXC13P31276 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC13P31276 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC13P31276 AC074051.2-201ENST00000565115 352 ntBASIC18.82■□□□□ 0.6
HOXC13P31276 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXC13P31276 AL121772.3-201ENST00000610840 674 ntBASIC18.82■□□□□ 0.6
HOXC13P31276 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC13P31276 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC13P31276 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC13P31276 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC13P31276 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC13P31276 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC13P31276 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HOXC13P31276 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC13P31276 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC13P31276 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC13P31276 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC13P31276 AC012615.1-201ENST00000565797 1299 ntBASIC18.81■□□□□ 0.6
HOXC13P31276 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC13P31276 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC13P31276 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 AC120498.9-201ENST00000339021 3867 ntBASIC18.81■□□□□ 0.6
HOXC13P31276 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC13P31276 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC13P31276 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC13P31276 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC13P31276 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXC13P31276 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXC13P31276 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXC13P31276 AC106795.1-205ENST00000512851 1056 ntBASIC18.8■□□□□ 0.6
HOXC13P31276 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC13P31276 AP005901.3-202ENST00000581653 237 ntBASIC18.8■□□□□ 0.6
HOXC13P31276 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXC13P31276 AC008687.5-201ENST00000593746 558 ntBASIC18.8■□□□□ 0.6
HOXC13P31276 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXC13P31276 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms