Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.33■□□□□ 0.37
PRPH2P23942 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PRPH2P23942 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.33■□□□□ 0.37
PRPH2P23942 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRPH2P23942 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.33■□□□□ 0.37
PRPH2P23942 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PRPH2P23942 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.33■□□□□ 0.36
PRPH2P23942 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRPH2P23942 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.33■□□□□ 0.36
PRPH2P23942 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PRPH2P23942 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.33■□□□□ 0.36
PRPH2P23942 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.33■□□□□ 0.36
PRPH2P23942 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRPH2P23942 ECEL1P2-202ENST00000465689 757 ntBASIC17.33■□□□□ 0.36
PRPH2P23942 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.33■□□□□ 0.36
PRPH2P23942 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.33■□□□□ 0.36
PRPH2P23942 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.33■□□□□ 0.36
PRPH2P23942 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.33■□□□□ 0.36
PRPH2P23942 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRPH2P23942 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRPH2P23942 AC012317.2-201ENST00000623305 2251 ntBASIC17.33■□□□□ 0.36
PRPH2P23942 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PRPH2P23942 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRPH2P23942 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRPH2P23942 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.33■□□□□ 0.36
PRPH2P23942 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PRPH2P23942 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
PRPH2P23942 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.33■□□□□ 0.36
PRPH2P23942 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 AC020763.4-201ENST00000623414 4170 ntBASIC17.32■□□□□ 0.36
PRPH2P23942 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRPH2P23942 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 LINC00167-201ENST00000530583 1419 ntBASIC17.32■□□□□ 0.36
PRPH2P23942 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.32■□□□□ 0.36
PRPH2P23942 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 ECEL1P3-201ENST00000427961 737 ntBASIC17.32■□□□□ 0.36
PRPH2P23942 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.32■□□□□ 0.36
PRPH2P23942 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.32■□□□□ 0.36
PRPH2P23942 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.32■□□□□ 0.36
PRPH2P23942 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.32■□□□□ 0.36
PRPH2P23942 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.32■□□□□ 0.36
PRPH2P23942 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRPH2P23942 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRPH2P23942 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPH2P23942 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPH2P23942 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.31■□□□□ 0.36
PRPH2P23942 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPH2P23942 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PRPH2P23942 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PRPH2P23942 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRPH2P23942 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPH2P23942 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.31■□□□□ 0.36
PRPH2P23942 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPH2P23942 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.31■□□□□ 0.36
PRPH2P23942 AC113404.2-201ENST00000507884 177 ntBASIC17.31■□□□□ 0.36
PRPH2P23942 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPH2P23942 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.31■□□□□ 0.36
PRPH2P23942 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms