Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ATF1P18846 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATF1P18846 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATF1P18846 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.02■□□□□ 0.16
ATF1P18846 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ATF1P18846 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATF1P18846 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.02■□□□□ 0.16
ATF1P18846 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.02■□□□□ 0.16
ATF1P18846 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.02■□□□□ 0.16
ATF1P18846 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.02■□□□□ 0.16
ATF1P18846 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATF1P18846 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ATF1P18846 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATF1P18846 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
ATF1P18846 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATF1P18846 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.01■□□□□ 0.15
ATF1P18846 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATF1P18846 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.01■□□□□ 0.15
ATF1P18846 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.01■□□□□ 0.15
ATF1P18846 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 AP000692.2-201ENST00000608391 879 ntBASIC16.01■□□□□ 0.15
ATF1P18846 FAM197Y4-202ENST00000622692 608 ntBASIC16.01■□□□□ 0.15
ATF1P18846 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATF1P18846 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 FSCN1P1-201ENST00000568912 1481 ntBASIC16.01■□□□□ 0.15
ATF1P18846 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATF1P18846 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.01■□□□□ 0.15
ATF1P18846 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.01■□□□□ 0.15
ATF1P18846 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATF1P18846 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATF1P18846 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ATF1P18846 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATF1P18846 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATF1P18846 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 AC022211.2-201ENST00000585075 2527 ntBASIC16■□□□□ 0.15
ATF1P18846 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16■□□□□ 0.15
ATF1P18846 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16■□□□□ 0.15
ATF1P18846 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16■□□□□ 0.15
ATF1P18846 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16■□□□□ 0.15
ATF1P18846 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 AL359736.2-201ENST00000621992 437 ntBASIC16■□□□□ 0.15
ATF1P18846 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16■□□□□ 0.15
ATF1P18846 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ATF1P18846 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
ATF1P18846 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16■□□□□ 0.15
ATF1P18846 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16■□□□□ 0.15
ATF1P18846 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATF1P18846 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms