Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.54■□□□□ 0.24
FREM3P0C091 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM3P0C091 KRT8P26-201ENST00000534154 1276 ntBASIC16.54■□□□□ 0.24
FREM3P0C091 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM3P0C091 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.54■□□□□ 0.24
FREM3P0C091 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM3P0C091 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM3P0C091 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.54■□□□□ 0.24
FREM3P0C091 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
FREM3P0C091 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM3P0C091 MIR3180-4-201ENST00000582223 153 ntBASIC16.54■□□□□ 0.24
FREM3P0C091 AC004263.2-201ENST00000617183 678 ntBASIC16.54■□□□□ 0.24
FREM3P0C091 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM3P0C091 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.53■□□□□ 0.24
FREM3P0C091 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.53■□□□□ 0.24
FREM3P0C091 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FREM3P0C091 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.53■□□□□ 0.24
FREM3P0C091 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
FREM3P0C091 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.53■□□□□ 0.24
FREM3P0C091 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.53■□□□□ 0.24
FREM3P0C091 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.53■□□□□ 0.24
FREM3P0C091 MIR3652-201ENST00000579335 131 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 AC005336.2-201ENST00000593183 939 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 CLEC4GP1-201ENST00000596555 870 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 AC083906.6-201ENST00000641366 219 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FREM3P0C091 AC233702.3-201ENST00000578656 1387 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
FREM3P0C091 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
FREM3P0C091 Z83836.1-201ENST00000624605 1642 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.53■□□□□ 0.24
FREM3P0C091 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 BICD1-207ENST00000551848 1962 ntBASIC16.53■□□□□ 0.24
FREM3P0C091 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FREM3P0C091 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FREM3P0C091 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.24
FREM3P0C091 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FREM3P0C091 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.52■□□□□ 0.24
FREM3P0C091 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.52■□□□□ 0.24
FREM3P0C091 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FREM3P0C091 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.52■□□□□ 0.24
FREM3P0C091 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
FREM3P0C091 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.52■□□□□ 0.24
FREM3P0C091 AL390961.4-201ENST00000623958 2535 ntBASIC16.52■□□□□ 0.24
FREM3P0C091 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FREM3P0C091 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FREM3P0C091 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.52■□□□□ 0.23
FREM3P0C091 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.52■□□□□ 0.23
FREM3P0C091 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.52■□□□□ 0.23
FREM3P0C091 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.52■□□□□ 0.23
FREM3P0C091 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.52■□□□□ 0.23
FREM3P0C091 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.52■□□□□ 0.23
FREM3P0C091 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
FREM3P0C091 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FREM3P0C091 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms