Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A2P08572 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.28■□□□□ 0.52
COL4A2P08572 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COL4A2P08572 AP000867.4-201ENST00000641616 219 ntBASIC18.28■□□□□ 0.52
COL4A2P08572 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A2P08572 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A2P08572 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A2P08572 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A2P08572 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A2P08572 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A2P08572 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A2P08572 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
COL4A2P08572 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A2P08572 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.27■□□□□ 0.52
COL4A2P08572 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A2P08572 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 AL355385.1-201ENST00000606123 409 ntBASIC18.27■□□□□ 0.52
COL4A2P08572 AD001527.2-201ENST00000622994 785 ntBASIC18.27■□□□□ 0.52
COL4A2P08572 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A2P08572 AFG3L1P-217ENST00000557444 2447 ntBASIC18.27■□□□□ 0.52
COL4A2P08572 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A2P08572 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A2P08572 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A2P08572 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.27■□□□□ 0.51
COL4A2P08572 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A2P08572 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.27■□□□□ 0.51
COL4A2P08572 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 ELK2BP-201ENST00000415014 1224 ntBASIC18.26■□□□□ 0.51
COL4A2P08572 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 AP006288.1-201ENST00000446065 395 ntBASIC18.26■□□□□ 0.51
COL4A2P08572 AC108751.1-201ENST00000490852 363 ntBASIC18.26■□□□□ 0.51
COL4A2P08572 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.26■□□□□ 0.51
COL4A2P08572 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 AC005082.1-201ENST00000413042 2259 ntBASIC18.26■□□□□ 0.51
COL4A2P08572 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A2P08572 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A2P08572 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL4A2P08572 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.26■□□□□ 0.51
COL4A2P08572 BX005266.1-201ENST00000473402 457 ntBASIC18.26■□□□□ 0.51
COL4A2P08572 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A2P08572 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
COL4A2P08572 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
COL4A2P08572 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL4A2P08572 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A2P08572 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL4A2P08572 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 AC148477.5-201ENST00000625164 1645 ntBASIC18.25■□□□□ 0.51
COL4A2P08572 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A2P08572 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL4A2P08572 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A2P08572 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A2P08572 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL4A2P08572 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.24■□□□□ 0.51
COL4A2P08572 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
COL4A2P08572 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
COL4A2P08572 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A2P08572 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A2P08572 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A2P08572 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A2P08572 AC027796.2-201ENST00000575326 344 ntBASIC18.24■□□□□ 0.51
COL4A2P08572 AC134684.3-201ENST00000641758 218 ntBASIC18.24■□□□□ 0.51
COL4A2P08572 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A2P08572 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A2P08572 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL4A2P08572 AC002310.6-201ENST00000624451 1377 ntBASIC18.24■□□□□ 0.51
COL4A2P08572 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms