Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL1A2P08123 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL1A2P08123 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.9■□□□□ 0.78
COL1A2P08123 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 RBM17P3-201ENST00000417687 1192 ntBASIC19.9■□□□□ 0.78
COL1A2P08123 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 AC132008.2-207ENST00000454517 770 ntBASIC19.9■□□□□ 0.78
COL1A2P08123 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.9■□□□□ 0.78
COL1A2P08123 AC008608.2-201ENST00000606089 416 ntBASIC19.9■□□□□ 0.78
COL1A2P08123 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 TP73-AS1-207ENST00000624167 988 ntBASIC19.9■□□□□ 0.78
COL1A2P08123 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A2P08123 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A2P08123 PHGDH-209ENST00000641074 1780 ntBASIC19.9■□□□□ 0.78
COL1A2P08123 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.89■□□□□ 0.78
COL1A2P08123 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.89■□□□□ 0.78
COL1A2P08123 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.89■□□□□ 0.78
COL1A2P08123 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.89■□□□□ 0.78
COL1A2P08123 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.89■□□□□ 0.77
COL1A2P08123 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL1A2P08123 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL1A2P08123 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
COL1A2P08123 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.89■□□□□ 0.77
COL1A2P08123 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 MRPL3P1-201ENST00000400109 1033 ntBASIC19.89■□□□□ 0.77
COL1A2P08123 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.89■□□□□ 0.77
COL1A2P08123 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.89■□□□□ 0.77
COL1A2P08123 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL1A2P08123 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A2P08123 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL1A2P08123 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.88■□□□□ 0.77
COL1A2P08123 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.88■□□□□ 0.77
COL1A2P08123 AC064862.7-201ENST00000604520 867 ntBASIC19.88■□□□□ 0.77
COL1A2P08123 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 AL355877.3-201ENST00000622820 899 ntBASIC19.88■□□□□ 0.77
COL1A2P08123 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.88■□□□□ 0.77
COL1A2P08123 AC097374.2-201ENST00000618617 1306 ntBASIC19.88■□□□□ 0.77
COL1A2P08123 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COL1A2P08123 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
COL1A2P08123 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL1A2P08123 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.88■□□□□ 0.77
COL1A2P08123 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A2P08123 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms