Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TPM3P06753 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.46■□□□□ 0.87
TPM3P06753 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.46■□□□□ 0.87
TPM3P06753 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM3P06753 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.45■□□□□ 0.87
TPM3P06753 AL118508.1-201ENST00000613502 2345 ntBASIC20.45■□□□□ 0.87
TPM3P06753 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.45■□□□□ 0.86
TPM3P06753 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.45■□□□□ 0.86
TPM3P06753 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.45■□□□□ 0.86
TPM3P06753 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.45■□□□□ 0.86
TPM3P06753 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
TPM3P06753 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.45■□□□□ 0.86
TPM3P06753 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TPM3P06753 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 MYLKP1-201ENST00000509077 1580 ntBASIC20.45■□□□□ 0.86
TPM3P06753 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.45■□□□□ 0.86
TPM3P06753 FER1L4-210ENST00000615531 5998 ntBASIC20.45■□□□□ 0.86
TPM3P06753 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM3P06753 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.45■□□□□ 0.86
TPM3P06753 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.45■□□□□ 0.86
TPM3P06753 PP12613-201ENST00000424958 2230 ntBASIC20.45■□□□□ 0.86
TPM3P06753 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TPM3P06753 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 AC006116.8-202ENST00000587620 1550 ntBASIC20.44■□□□□ 0.86
TPM3P06753 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.44■□□□□ 0.86
TPM3P06753 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.44■□□□□ 0.86
TPM3P06753 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.44■□□□□ 0.86
TPM3P06753 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.44■□□□□ 0.86
TPM3P06753 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TPM3P06753 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.44■□□□□ 0.86
TPM3P06753 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM3P06753 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.43■□□□□ 0.86
TPM3P06753 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
TPM3P06753 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.43■□□□□ 0.86
TPM3P06753 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM3P06753 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TPM3P06753 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM3P06753 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TPM3P06753 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.43■□□□□ 0.86
TPM3P06753 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.43■□□□□ 0.86
TPM3P06753 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM3P06753 AC131212.4-201ENST00000623606 975 ntBASIC20.43■□□□□ 0.86
TPM3P06753 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM3P06753 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TPM3P06753 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.43■□□□□ 0.86
TPM3P06753 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM3P06753 AC011676.5-201ENST00000624864 2660 ntBASIC20.43■□□□□ 0.86
TPM3P06753 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms