Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFRSF6BO95407 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TNFRSF6BO95407 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFRSF6BO95407 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.26□□□□□ -0.29
TNFRSF6BO95407 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TNFRSF6BO95407 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.26□□□□□ -0.29
TNFRSF6BO95407 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 KRT8P41-201ENST00000533985 1514 ntBASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 KRT8P3-201ENST00000519669 1449 ntBASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TNFRSF6BO95407 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.24□□□□□ -0.29
TNFRSF6BO95407 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 AC133552.2-202ENST00000575694 574 ntBASIC13.24□□□□□ -0.29
TNFRSF6BO95407 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TNFRSF6BO95407 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFRSF6BO95407 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFRSF6BO95407 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFRSF6BO95407 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFRSF6BO95407 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms